Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein cspg | DQE83_01190 | Not Available | Negative | 226796 - 227008 | 7781.14 |
| cold-shock protein csph | DQE83_01195 | Not Available | Positive | 227294 - 227506 | 7720.48 |
| hypothetical protein | DQE83_01200 | Not Available | Positive | 227930 - 228253 | 10075.8 |
| lipoprotein gfcb | DQE83_01205 | Not Available | Positive | 228360 - 229004 | 24196.9 |
| hypothetical protein | DQE83_01210 | Not Available | Positive | 229001 - 229747 | 27219.6 |
| yjbh domain-containing protein | DQE83_01215 | Not Available | Positive | 229747 - 231843 | 78721.3 |
| polysaccharide export protein wza | DQE83_01220 | Not Available | Positive | 231889 - 233028 | 41743.2 |
| protein-tyrosine-phosphatase | DQE83_01225 | Not Available | Positive | 233016 - 233462 | 16386.9 |
| tyrosine-protein kinase | DQE83_01230 | Not Available | Positive | 233482 - 235662 | 81246.5 |
| appa family phytase/histidine-type acid phosphatase | DQE83_01235 | Not Available | Negative | 235783 - 237081 | 47120.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





