Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | DQE83_24820 | Not Available | Positive | 4864098 - 4865462 | 52876.7 |
| type vi secretion protein | DQE83_24825 | Not Available | Positive | 4865739 - 4865837 | 3768.67 |
| dotu family type iv/vi secretion system protein | DQE83_24830 | Not Available | Positive | 4865834 - 4866448 | 23590.8 |
| type vi secretion protein | DQE83_24835 | Not Available | Positive | 4866455 - 4869859 | 130488.0 |
| type vi secretion system atpase tssh | DQE83_24840 | Not Available | Positive | 4869863 - 4872394 | 94712.0 |
| hypothetical protein | DQE83_24845 | Not Available | Positive | 4873086 - 4874225 | 43886.4 |
| hypothetical protein | DQE83_24855 | Not Available | Positive | 4875101 - 4875322 | 8510.31 |
| is481 family transposase | DQE83_24860 | Not Available | Negative | 4875384 - 4876424 | 39711.4 |
| hypothetical protein | DQE83_24875 | Not Available | Negative | 4877345 - 4877764 | 15545.5 |
| hypothetical protein | DQE83_24880 | Not Available | Negative | 4877784 - 4878383 | 21904.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





