Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | DQE83_24720 | Not Available | Negative | 4850714 - 4851343 | 22244.8 |
| 30s ribosomal protein s10 | DQE83_24725 | Not Available | Negative | 4851376 - 4851687 | 11736.3 |
| hypothetical protein | DQE83_24730 | Not Available | Negative | 4851816 - 4851977 | 6030.45 |
| prepilin peptidase | DQE83_24735 | Not Available | Positive | 4852066 - 4852533 | 17146.2 |
| bacterioferritin | DQE83_24740 | Not Available | Negative | 4852530 - 4853006 | 18353.1 |
| bacterioferritin-associated ferredoxin | DQE83_24745 | Not Available | Negative | 4853079 - 4853273 | 7475.27 |
| ferredoxin | DQE83_24750 | Not Available | Positive | 4853214 - 4853354 | 5140.81 |
| elongation factor tu | DQE83_24755 | Not Available | Negative | 4853456 - 4853551 | 3176.95 |
| is3 family transposase | DQE83_24760 | Not Available | Negative | 4853552 - 4853679 | 4652.65 |
| type vi secretion system contractile sheath small subunit | DQE83_24765 | Not Available | Positive | 4854033 - 4854509 | 17982.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





