Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel protein mscl | DQE83_24570 | Not Available | Positive | 4836441 - 4836851 | 14957.7 |
| ribosome alternative rescue factor arfa | DQE83_24575 | Not Available | Negative | 4836848 - 4837066 | 8171.86 |
| heavy metal-responsive transcriptional regulator | DQE83_24580 | Not Available | Negative | 4837122 - 4837547 | 16180.4 |
| duf1992 domain-containing protein | DQE83_24585 | Not Available | Negative | 4837558 - 4837926 | 14017.7 |
| 50s ribosomal protein l17 | DQE83_24590 | Not Available | Negative | 4838033 - 4838416 | 14365.4 |
| dna-directed rna polymerase subunit alpha | DQE83_24595 | Not Available | Negative | 4838457 - 4839446 | 36513.9 |
| 30s ribosomal protein s4 | DQE83_24600 | Not Available | Negative | 4839472 - 4840092 | 23470.5 |
| 30s ribosomal protein s11 | DQE83_24605 | Not Available | Negative | 4840126 - 4840515 | 13845.7 |
| 30s ribosomal protein s13 | DQE83_24610 | Not Available | Negative | 4840532 - 4840888 | 13100.2 |
| 50s ribosomal protein l36 | DQE83_24615 | Not Available | Negative | 4841035 - 4841151 | 4364.59 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





