Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease v | DQE83_24415 | Not Available | Negative | 4805862 - 4806533 | 24690.0 |
| uroporphyrinogen decarboxylase | DQE83_24420 | Not Available | Negative | 4806543 - 4807607 | 39259.4 |
| nadh pyrophosphatase | DQE83_24425 | Not Available | Negative | 4807647 - 4808420 | 29690.6 |
| sigma d regulator | DQE83_24430 | Not Available | Positive | 4808515 - 4808991 | 18243.9 |
| phosphomethylpyrimidine synthase thic | DQE83_24435 | Not Available | Positive | 4809224 - 4811119 | 70799.3 |
| thiamine phosphate synthase | DQE83_24440 | Not Available | Positive | 4811119 - 4811754 | 23042.7 |
| thiazole biosynthesis adenylyltransferase thif | DQE83_24445 | Not Available | Positive | 4811747 - 4812502 | 27001.4 |
| sulfur carrier protein this | DQE83_24450 | Not Available | Positive | 4812486 - 4812686 | 7337.8 |
| thiazole synthase | DQE83_24455 | Not Available | Positive | 4812688 - 4813458 | 26814.6 |
| 2-iminoacetate synthase thih | DQE83_24460 | Not Available | Positive | 4813455 - 4814588 | 43311.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





