Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone tord | DQE83_01140 | Not Available | Negative | 216072 - 216671 | 22510.8 |
| trimethylamine-n-oxide reductase tora | DQE83_01145 | Not Available | Negative | 216668 - 219214 | 94596.3 |
| pentaheme c-type cytochrome torc | DQE83_01150 | Not Available | Negative | 219214 - 220386 | 43597.8 |
| two-component system response regulator torr | DQE83_01155 | Not Available | Positive | 220516 - 221208 | 26244.9 |
| tmao reductase system periplasmic protein tort | DQE83_01160 | Not Available | Negative | 221181 - 222209 | 37909.9 |
| tmao reductase system sensor histidine kinase/response regulator tors | DQE83_01165 | Not Available | Positive | 222292 - 225036 | 101063.0 |
| electron transporter yccm | DQE83_01170 | Not Available | Positive | 225077 - 226180 | 41410.8 |
| protein gnsa | DQE83_01175 | Not Available | Negative | 226229 - 226402 | 6575.99 |
| cold-shock protein | DQE83_01180 | Not Available | Negative | 226392 - 226622 | 8678.58 |
| cold-shock protein | DQE83_01185 | Not Available | Negative | 226597 - 226785 | 7104.55 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





