Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | DQE83_24360 | Not Available | Positive | 4793489 - 4797270 | 135128.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | DQE83_24370 | Not Available | Positive | 4797818 - 4799407 | 57315.5 |
| phosphoribosylamine--glycine ligase | DQE83_24375 | Not Available | Positive | 4799419 - 4800708 | 45861.8 |
| two-component system response regulator zrar | DQE83_24380 | Not Available | Negative | 4800705 - 4802030 | 48343.3 |
| two-component system sensor histidine kinase zras | DQE83_24385 | Not Available | Negative | 4802027 - 4803403 | 50449.0 |
| zinc resistance-associated protein | DQE83_24390 | Not Available | Positive | 4803510 - 4803638 | 4860.6 |
| zinc resistance-associated protein zrap | DQE83_24395 | Not Available | Positive | 4803641 - 4804060 | 15024.0 |
| duf1481 domain-containing protein | DQE83_24400 | Not Available | Negative | 4804062 - 4804757 | 26352.9 |
| dna-binding protein hu-alpha | DQE83_24405 | Not Available | Negative | 4804770 - 4805042 | 9535.51 |
| duf416 family protein | DQE83_24410 | Not Available | Negative | 4805229 - 4805819 | 22613.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





