Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d,d-dipeptide abc transporter permease | DQE83_24075 | Not Available | Negative | 4752693 - 4753589 | 31901.8 |
| abc transporter permease | DQE83_24080 | Not Available | Negative | 4753586 - 4754608 | 37370.3 |
| abc transporter substrate-binding protein | DQE83_24085 | Not Available | Negative | 4754610 - 4756160 | 57575.1 |
| d-alanyl-d-alanine dipeptidase | DQE83_24090 | Not Available | Negative | 4756174 - 4756755 | 21270.3 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | DQE83_24095 | Not Available | Negative | 4757013 - 4759436 | 91222.8 |
| diguanylate cyclase | DQE83_24100 | Not Available | Negative | 4759437 - 4760819 | 53124.7 |
| glycoside hydrolase family 10 protein | DQE83_24105 | Not Available | Negative | 4761196 - 4762515 | 49663.9 |
| glutamate:gamma-aminobutyrate antiporter | DQE83_24110 | Not Available | Negative | 4762646 - 4764181 | 55080.0 |
| glutamate decarboxylase | DQE83_24115 | Not Available | Negative | 4764337 - 4764420 | 3118.65 |
| autotransporter outer membrane beta-barrel domain-containing protein | DQE83_24120 | Not Available | Positive | 4764421 - 4764828 | 15342.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





