Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose abc transporter substrate-binding protein | DQE83_23810 | Not Available | Positive | 4698504 - 4699493 | 35504.8 |
| arabinose import atp-binding protein arag | DQE83_23815 | Not Available | Positive | 4699563 - 4701077 | 55021.6 |
| arabinose abc transporter permease | DQE83_23820 | Not Available | Positive | 4701092 - 4702078 | 34199.0 |
| trehalose-phosphatase | DQE83_23825 | Not Available | Positive | 4702245 - 4703045 | 29162.9 |
| trehalose-6-phosphate synthase | DQE83_23830 | Not Available | Positive | 4703020 - 4704444 | 53614.1 |
| universal stress protein uspc | DQE83_23835 | Not Available | Negative | 4704451 - 4704879 | 15669.9 |
| flagellar transcriptional activator flhd | DQE83_23840 | Not Available | Positive | 4705660 - 4706010 | 13317.2 |
| flagellar transcriptional regulator flhc | DQE83_23845 | Not Available | Positive | 4706013 - 4706591 | 21567.3 |
| flagellar motor stator protein mota | DQE83_23850 | Not Available | Positive | 4706718 - 4707605 | 32027.4 |
| motility protein b | DQE83_23855 | Not Available | Positive | 4707602 - 4708528 | 34188.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





