Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine/o-acetylserine transporter | DQE83_23520 | Not Available | Positive | 4658298 - 4658885 | 21230.5 |
| autonomous glycyl radical cofactor grca | DQE83_23525 | Not Available | Negative | 4658940 - 4659323 | 14269.0 |
| uracil-dna glycosylase | DQE83_23530 | Not Available | Positive | 4659627 - 4660316 | 25682.6 |
| trna/rrna methyltransferase | DQE83_23535 | Not Available | Negative | 4660364 - 4661401 | 37782.5 |
| hypothetical protein | DQE83_23540 | Not Available | Negative | 4661391 - 4661594 | 7646.15 |
| thiol disulfide reductase thioredoxin | DQE83_23545 | Not Available | Positive | 4661608 - 4662027 | 15555.6 |
| dtw domain-containing protein yfip | DQE83_23550 | Not Available | Positive | 4662096 - 4662794 | 25996.5 |
| protein lysine acetyltransferase | DQE83_23555 | Not Available | Positive | 4662826 - 4665486 | 97976.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DQE83_23560 | Not Available | Positive | 4665600 - 4666955 | 52803.8 |
| yfim family lipoprotein | DQE83_23565 | Not Available | Positive | 4667001 - 4667324 | 11793.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





