Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase | DQE83_22965 | Not Available | Negative | 4587106 - 4587777 | 25073.6 |
| sira-like protein | DQE83_22970 | Not Available | Negative | 4587886 - 4588119 | 8639.5 |
| yeee/yede family protein | DQE83_22975 | Not Available | Negative | 4588116 - 4589321 | 44431.5 |
| lipoprotein | DQE83_22985 | Not Available | Positive | 4589508 - 4589921 | 15002.1 |
| alpha-amylase | DQE83_22990 | Not Available | Negative | 4589955 - 4591442 | 56589.2 |
| flagellar protein flit | DQE83_22995 | Not Available | Negative | 4591520 - 4591885 | 13843.7 |
| flagella export chaperone flis | DQE83_23000 | Not Available | Negative | 4591885 - 4592295 | 15050.1 |
| flagellar filament capping protein flid | DQE83_23005 | Not Available | Negative | 4592320 - 4593726 | 48485.1 |
| flagellin flic | DQE83_23015 | Not Available | Positive | 4593992 - 4595824 | 62312.1 |
| rna polymerase sigma factor flia | DQE83_23020 | Not Available | Positive | 4596144 - 4596863 | 27522.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





