Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | DQE83_22395 | Not Available | Negative | 4482553 - 4483290 | 27830.9 |
| ribosomal large subunit pseudouridine synthase d | DQE83_22400 | Not Available | Positive | 4483425 - 4484405 | 37109.8 |
| peptidoglycan editing factor pgef | DQE83_22405 | Not Available | Positive | 4484402 - 4485133 | 26456.5 |
| chaperone protein clpb | DQE83_22410 | Not Available | Positive | 4485263 - 4487836 | 95590.8 |
| hypothetical protein | DQE83_22415 | Not Available | Negative | 4488105 - 4490294 | 83570.1 |
| Trna-ala | Not Available | Not Available | Positive | 4490502 - 4490577 | Not Available |
| hypothetical protein | DQE83_22425 | Not Available | Positive | 4490813 - 4491157 | 12720.4 |
| helix-turn-helix domain-containing protein | DQE83_22430 | Not Available | Positive | 4491159 - 4491551 | 14956.0 |
| glutamate--trna ligase | DQE83_22435 | Not Available | Negative | 4491602 - 4493017 | 53804.7 |
| Trna-val | Not Available | Not Available | Positive | 4493276 - 4493351 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





