Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DQE83_22050 | Not Available | Negative | 4432159 - 4433385 | 45947.1 |
| duf4154 domain-containing protein | DQE83_22055 | Not Available | Negative | 4433375 - 4433893 | 18979.2 |
| hypothetical protein | DQE83_22060 | Not Available | Negative | 4434043 - 4434408 | 13218.4 |
| 3-deoxy-7-phosphoheptulonate synthase arof | DQE83_22065 | Not Available | Positive | 4434618 - 4435688 | 38878.4 |
| bifunctional chorismate mutase/prephenate dehydrogenase | DQE83_22070 | Not Available | Positive | 4435699 - 4436820 | 41973.9 |
| bifunctional chorismate mutase/prephenate dehydratase | DQE83_22075 | Not Available | Negative | 4436864 - 4438024 | 43200.9 |
| hypothetical protein | DQE83_22080 | Not Available | Negative | 4438123 - 4438170 | 1912.35 |
| hypothetical protein | DQE83_22380 | Not Available | Positive | 4481359 - 4481721 | 12719.7 |
| ribosome-associated inhibitor a | DQE83_22385 | Not Available | Negative | 4481941 - 4482282 | 12785.3 |
| hypothetical protein | DQE83_22390 | Not Available | Negative | 4482317 - 4482523 | 7922.89 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





