Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone grpe | DQE83_22000 | Not Available | Positive | 4424980 - 4425174 | 7135.71 |
| nucleotide exchange factor grpe | DQE83_22005 | Not Available | Positive | 4425171 - 4425764 | 21815.1 |
| duf21 domain-containing protein | DQE83_22010 | Not Available | Negative | 4425819 - 4427060 | 46353.9 |
| inner membrane protein ypjd | DQE83_22015 | Not Available | Negative | 4427126 - 4427917 | 29263.9 |
| signal recognition particle protein | DQE83_22020 | Not Available | Positive | 4428084 - 4429445 | 49790.5 |
| 30s ribosomal protein s16 | DQE83_22025 | Not Available | Positive | 4429582 - 4429830 | 9191.08 |
| ribosome maturation factor rimm | DQE83_22030 | Not Available | Positive | 4429849 - 4430397 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DQE83_22035 | Not Available | Positive | 4430428 - 4431195 | 28424.0 |
| 50s ribosomal protein l19 | DQE83_22040 | Not Available | Positive | 4431237 - 4431584 | 13134.0 |
| ompa family protein | DQE83_22045 | Not Available | Negative | 4431661 - 4432143 | 17301.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





