Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_21895 | Not Available | Negative | 4407043 - 4407264 | 8407.04 |
| hypothetical protein | DQE83_21900 | Not Available | Positive | 4407238 - 4407417 | 6771.09 |
| hypothetical protein | DQE83_21905 | Not Available | Negative | 4407369 - 4407578 | 7747.15 |
| stringent starvation protein a | DQE83_21910 | Not Available | Positive | 4407520 - 4408158 | 24306.3 |
| stringent starvation protein b | DQE83_21915 | Not Available | Positive | 4408164 - 4408661 | 18233.4 |
| c4-dicarboxylate transporter dcuc | DQE83_21920 | Not Available | Negative | 4408705 - 4410072 | 48819.9 |
| transcriptional regulator nanr | DQE83_21925 | Not Available | Positive | 4410453 - 4411244 | 29496.0 |
| n-acetylneuraminate lyase | DQE83_21930 | Not Available | Positive | 4411366 - 4412259 | 32595.4 |
| mfs transporter | DQE83_21935 | Not Available | Positive | 4412368 - 4413858 | 53585.4 |
| n-acetylmannosamine-6-phosphate 2-epimerase | DQE83_21940 | Not Available | Positive | 4413906 - 4414595 | 24075.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





