Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | DQE83_21745 | Not Available | Positive | 4375856 - 4376818 | 34849.6 |
| duf4432 domain-containing protein | DQE83_21750 | Not Available | Positive | 4376815 - 4377861 | 38633.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | DQE83_21755 | Not Available | Negative | 4377953 - 4379302 | 49323.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DQE83_21760 | Not Available | Negative | 4379313 - 4379783 | 16688.2 |
| acetyl-coa carboxylase | DQE83_21765 | Not Available | Negative | 4379756 - 4379944 | 7037.4 |
| oxidoreductase | DQE83_21770 | Not Available | Negative | 4380761 - 4381735 | 34670.9 |
| rnase e specificity factor csrd | DQE83_21775 | Not Available | Positive | 4381887 - 4383827 | 73433.8 |
| hypothetical protein | DQE83_21780 | Not Available | Negative | 4383836 - 4384024 | 7062.6 |
| hypothetical protein | DQE83_21785 | Not Available | Negative | 4383972 - 4384154 | 6771.08 |
| rod shape-determining protein | DQE83_21790 | Not Available | Positive | 4384132 - 4385175 | 36954.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





