Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 | DQE83_21585 | Not Available | Positive | 4349453 - 4349827 | 13737.9 |
| 30s ribosomal protein s7 | DQE83_21590 | Not Available | Positive | 4349924 - 4350394 | 17605.4 |
| elongation factor g | DQE83_21595 | Not Available | Positive | 4350491 - 4352605 | 77629.8 |
| elongation factor tu | DQE83_21600 | Not Available | Positive | 4352676 - 4352962 | 10448.2 |
| Trna-thr | Not Available | Not Available | Positive | 4353160 - 4353235 | Not Available |
| amino acid abc transporter atp-binding protein | DQE83_21620 | Not Available | Negative | 4353453 - 4354211 | 28555.0 |
| amino acid abc transporter permease | DQE83_21625 | Not Available | Negative | 4354219 - 4355322 | 41440.7 |
| abc transporter permease subunit | DQE83_21630 | Not Available | Negative | 4355332 - 4356513 | 43234.8 |
| amino acid abc transporter substrate-binding protein | DQE83_21635 | Not Available | Negative | 4356581 - 4357606 | 37078.8 |
| hypothetical protein | DQE83_21640 | Not Available | Negative | 4357635 - 4357811 | 6700.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





