Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4223 domain-containing protein | DQE83_21435 | Not Available | Negative | 4324390 - 4324557 | 5819.16 |
| uroporphyrinogen-iii c-methyltransferase | DQE83_21440 | Not Available | Negative | 4324804 - 4326177 | 49966.5 |
| nitrite transporter nirc | DQE83_21445 | Not Available | Negative | 4326196 - 4327002 | 28578.2 |
| nitrite reductase small subunit | DQE83_21450 | Not Available | Negative | 4327128 - 4327454 | 12284.7 |
| nitrite reductase large subunit | DQE83_21455 | Not Available | Negative | 4327451 - 4329994 | 93112.6 |
| mfs transporter | DQE83_21460 | Not Available | Negative | 4330256 - 4331437 | 43197.0 |
| peptidylprolyl isomerase a | DQE83_21465 | Not Available | Positive | 4331708 - 4332280 | 20432.5 |
| duf2559 family protein | DQE83_21470 | Not Available | Positive | 4332385 - 4332552 | 6702.13 |
| adenosine monophosphate-protein transferase | DQE83_21475 | Not Available | Positive | 4332542 - 4333144 | 22961.4 |
| anthranilate/aminodeoxychorismate synthase component ii | DQE83_21480 | Not Available | Positive | 4333176 - 4333739 | 20741.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





