Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbrial protein | DQE83_00940 | Not Available | Positive | 171645 - 172205 | 18943.2 |
| molecular chaperone | DQE83_00945 | Not Available | Positive | 172270 - 172992 | 26857.3 |
| fimbrial biogenesis outer membrane usher protein | DQE83_00950 | Not Available | Positive | 173045 - 175567 | 91157.3 |
| adhesin | DQE83_00955 | Not Available | Positive | 175583 - 176917 | 46864.0 |
| molecular chaperone | DQE83_00960 | Not Available | Positive | 176974 - 177603 | 23685.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 177786 - 177969 | Not Available |
| oxidoreductase | DQE83_00965 | Not Available | Negative | 177749 - 178531 | 28570.5 |
| transcriptional regulator | DQE83_00970 | Not Available | Positive | 179219 - 180031 | 30988.5 |
| fidl | DQE83_00975 | Not Available | Positive | 180036 - 180527 | 18998.6 |
| cyclic diguanylate phosphodiesterase | DQE83_00980 | Not Available | Negative | 180648 - 182180 | 57688.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





