Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhfx family plp-dependent enzyme | DQE83_21375 | Not Available | Positive | 4313072 - 4314235 | 42191.6 |
| phosphopentomutase | DQE83_21380 | Not Available | Positive | 4314235 - 4315461 | 44577.2 |
| phosphotriesterase-related protein | DQE83_21385 | Not Available | Positive | 4315458 - 4316336 | 32831.3 |
| duf2620 domain-containing protein | DQE83_21390 | Not Available | Positive | 4316347 - 4316700 | 12479.5 |
| hypothetical protein | DQE83_21395 | Not Available | Positive | 4316712 - 4318016 | 46461.2 |
| aminotransferase | DQE83_21400 | Not Available | Positive | 4318028 - 4319113 | 38600.8 |
| transcriptional regulator | DQE83_21405 | Not Available | Negative | 4319221 - 4319952 | 27822.2 |
| fructoselysine 6-kinase | DQE83_21410 | Not Available | Negative | 4320052 - 4320837 | 28441.5 |
| fructoselysine 3-epimerase | DQE83_21415 | Not Available | Negative | 4320837 - 4321664 | 30893.4 |
| sis domain-containing protein | DQE83_21425 | Not Available | Negative | 4321714 - 4322736 | 38585.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





