Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna transporter hofq | DQE83_21325 | Not Available | Positive | 4303475 - 4304713 | 44705.9 |
| shikimate kinase | DQE83_21330 | Not Available | Positive | 4305114 - 4305635 | 19539.2 |
| 3-dehydroquinate synthase | DQE83_21335 | Not Available | Positive | 4305692 - 4306780 | 38856.3 |
| cell division protein damx | DQE83_21340 | Not Available | Positive | 4306872 - 4308158 | 46092.2 |
| adenine-specific dna-methyltransferase | DQE83_21345 | Not Available | Positive | 4308265 - 4309101 | 32087.2 |
| ribulose-phosphate 3-epimerase | DQE83_21350 | Not Available | Positive | 4309119 - 4309796 | 24555.7 |
| phosphoglycolate phosphatase | DQE83_21355 | Not Available | Positive | 4309789 - 4310547 | 27404.8 |
| tryptophan--trna ligase | DQE83_21360 | Not Available | Positive | 4310540 - 4311544 | 37439.9 |
| hypothetical protein | DQE83_21365 | Not Available | Positive | 4311704 - 4312609 | 33572.5 |
| prd domain-containing protein | DQE83_21370 | Not Available | Positive | 4312626 - 4312988 | 13531.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





