Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding transcriptional accessory protein | DQE83_21225 | Not Available | Negative | 4283653 - 4285974 | 85030.5 |
| transcription elongation factor greb | DQE83_21230 | Not Available | Negative | 4286071 - 4286583 | 19958.9 |
| hypothetical protein | DQE83_21235 | Not Available | Positive | 4286500 - 4286685 | 7099.83 |
| dna-binding response regulator | DQE83_21240 | Not Available | Positive | 4286775 - 4287494 | 27355.3 |
| two-component system sensor histidine kinase envz | DQE83_21245 | Not Available | Positive | 4287491 - 4288843 | 50335.1 |
| transcriptional regulator | DQE83_21250 | Not Available | Negative | 4288875 - 4289171 | 11118.4 |
| type ii toxin-antitoxin system rele/pare family toxin | DQE83_21255 | Not Available | Negative | 4289266 - 4289547 | 10873.1 |
| phosphoenolpyruvate carboxykinase (atp) | DQE83_21260 | Not Available | Negative | 4289664 - 4291286 | 59579.6 |
| hypothetical protein | DQE83_21265 | Not Available | Positive | 4291458 - 4291589 | 4687.69 |
| duf4153 domain-containing protein | DQE83_21270 | Not Available | Positive | 4291665 - 4293389 | 64819.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





