Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | DQE83_21155 | Not Available | Positive | 4271758 - 4272288 | 20023.7 |
| hypothetical protein | DQE83_21160 | Not Available | Positive | 4272285 - 4272641 | 13444.3 |
| type vi secretion system tip protein vgrg | DQE83_21165 | Not Available | Positive | 4272863 - 4274857 | 74143.4 |
| duf1795 domain-containing protein | DQE83_21170 | Not Available | Positive | 4274907 - 4275359 | 17196.6 |
| pimeloyl-[acyl-carrier protein] methyl ester esterase | DQE83_21190 | Not Available | Positive | 4278534 - 4279304 | 28645.0 |
| recombination-promoting nuclease rpna | DQE83_21195 | Not Available | Negative | 4279333 - 4280211 | 33255.3 |
| hypothetical protein | DQE83_21200 | Not Available | Positive | 4280184 - 4280417 | 8609.41 |
| ferrous iron transporter c | DQE83_21205 | Not Available | Negative | 4280414 - 4280650 | 8660.66 |
| ferrous iron transporter b | DQE83_21210 | Not Available | Negative | 4280650 - 4282971 | 84448.7 |
| ferrous iron transporter a | DQE83_21215 | Not Available | Negative | 4282988 - 4283215 | 8371.31 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





