Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein | DQE83_21050 | Not Available | Positive | 4255156 - 4256301 | 42344.3 |
| polyamine abc transporter atp-binding protein | DQE83_21055 | Not Available | Positive | 4256319 - 4257332 | 37073.8 |
| abc transporter permease | DQE83_21060 | Not Available | Positive | 4257333 - 4258274 | 34393.3 |
| abc transporter permease | DQE83_21065 | Not Available | Positive | 4258264 - 4259058 | 28752.6 |
| aminobutyraldehyde dehydrogenase | DQE83_21070 | Not Available | Positive | 4259080 - 4260504 | 50869.9 |
| antibiotic acetyltransferase | DQE83_21075 | Not Available | Positive | 4260727 - 4261536 | 31154.3 |
| stress response membrane protein yncl | DQE83_21080 | Not Available | Negative | 4261938 - 4262033 | 3490.44 |
| ghot/ortt family toxin | DQE83_21085 | Not Available | Positive | 4262179 - 4262400 | 8514.81 |
| duf2526 domain-containing protein | DQE83_21090 | Not Available | Positive | 4262486 - 4262719 | 8800.41 |
| dmt family transporter | DQE83_21095 | Not Available | Negative | 4262720 - 4263169 | 15804.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





