Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_20895 | Not Available | Positive | 4223474 - 4224370 | 33290.1 |
| hypothetical protein | DQE83_20900 | Not Available | Positive | 4224386 - 4226143 | 65411.2 |
| hypothetical protein | DQE83_20905 | Not Available | Positive | 4226157 - 4227449 | 49701.6 |
| fmn-dependent nadh-azoreductase | DQE83_20910 | Not Available | Negative | 4227503 - 4228108 | 21716.9 |
| atp-dependent rna helicase hrpa | DQE83_20915 | Not Available | Positive | 4228309 - 4232211 | 149007.0 |
| duf218 domain-containing protein | DQE83_20920 | Not Available | Positive | 4232483 - 4233283 | 29658.3 |
| aldehyde dehydrogenase | DQE83_20925 | Not Available | Positive | 4233480 - 4234919 | 52269.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DQE83_20930 | Not Available | Negative | 4234961 - 4235962 | 35778.7 |
| cytochrome b561 | DQE83_20935 | Not Available | Positive | 4236151 - 4236681 | 20305.7 |
| hypothetical protein | DQE83_20940 | Not Available | Positive | 4236926 - 4237099 | 5764.08 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





