Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf333 domain-containing protein | DQE83_20845 | Not Available | Positive | 4207554 - 4207820 | 8696.44 |
| heat-shock protein hslj | DQE83_20850 | Not Available | Negative | 4207817 - 4208239 | 15166.5 |
| 2-hydroxyacid dehydrogenase | DQE83_20855 | Not Available | Negative | 4208350 - 4209339 | 36522.8 |
| ydbh family protein | DQE83_20860 | Not Available | Positive | 4209547 - 4212186 | 96874.2 |
| ynbe family lipoprotein | DQE83_20865 | Not Available | Positive | 4212183 - 4212368 | 6870.63 |
| duf1318 domain-containing protein | DQE83_20870 | Not Available | Positive | 4212376 - 4212696 | 11840.6 |
| autotransporter domain-containing protein | DQE83_20875 | Not Available | Positive | 4216760 - 4219261 | 86658.1 |
| oxidoreductase | DQE83_20880 | Not Available | Positive | 4219469 - 4220329 | 30777.9 |
| hypothetical protein | DQE83_20885 | Not Available | Positive | 4220393 - 4222699 | 86407.9 |
| cdp-alcohol phosphatidyltransferase family protein | DQE83_20890 | Not Available | Positive | 4222869 - 4223474 | 22592.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





