Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_20780 | Not Available | Negative | 4194010 - 4194264 | 10209.9 |
| type ii and iii secretion system | DQE83_20800 | Not Available | Negative | 4195278 - 4196618 | 46854.2 |
| hypothetical protein | DQE83_20805 | Not Available | Negative | 4196838 - 4198163 | 48823.0 |
| hypothetical protein | DQE83_20810 | Not Available | Negative | 4198240 - 4198602 | 13480.5 |
| hypothetical protein | DQE83_20815 | Not Available | Negative | 4198614 - 4200617 | 69424.8 |
| hypothetical protein | DQE83_20820 | Not Available | Negative | 4200674 - 4200907 | 7668.34 |
| universal stress protein uspf | DQE83_20825 | Not Available | Negative | 4201681 - 4202115 | 15959.4 |
| phosphoporin phoe | DQE83_20830 | Not Available | Negative | 4202256 - 4203389 | 41238.0 |
| hypothetical protein | DQE83_20835 | Not Available | Positive | 4203594 - 4203845 | 9731.15 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DQE83_20840 | Not Available | Negative | 4203756 - 4207280 | 128868.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





