Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 4163991 - 4164075 | Not Available |
| respiratory nitrate reductase subunit gamma | DQE83_20625 | Not Available | Negative | 4164614 - 4165291 | 25484.9 |
| nitrate reductase molybdenum cofactor assembly chaperone | DQE83_20630 | Not Available | Negative | 4165291 - 4166001 | 26341.1 |
| nitrate reductase subunit beta | DQE83_20635 | Not Available | Negative | 4165998 - 4167536 | 58083.6 |
| nitrate reductase subunit alpha | DQE83_20640 | Not Available | Negative | 4167533 - 4171276 | 140497.0 |
| nark family nitrate/nitrite mfs transporter | DQE83_20645 | Not Available | Negative | 4171669 - 4173060 | 49682.2 |
| hypothetical protein | DQE83_20650 | Not Available | Negative | 4173155 - 4173373 | 8585.29 |
| nitrate/nitrite two-component system sensor histidine kinase narx | DQE83_20655 | Not Available | Positive | 4173399 - 4175195 | 67070.9 |
| dna-binding response regulator | DQE83_20660 | Not Available | Positive | 4175188 - 4175838 | 23928.3 |
| ycho family inverse autotransporter domain-containing protein | DQE83_20665 | Not Available | Negative | 4175839 - 4177233 | 52076.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





