Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | DQE83_20455 | Not Available | Positive | 4135397 - 4136590 | 43000.6 |
| tryptophan synthase subunit alpha | DQE83_20460 | Not Available | Positive | 4136590 - 4137396 | 28685.8 |
| hypothetical protein | DQE83_20465 | Not Available | Positive | 4137777 - 4137956 | 6002.69 |
| ycie/ycif family protein | DQE83_20470 | Not Available | Positive | 4138042 - 4138542 | 18598.2 |
| hypothetical protein | DQE83_20475 | Not Available | Positive | 4138588 - 4139094 | 18992.6 |
| outer membrane protein w | DQE83_20480 | Not Available | Negative | 4139153 - 4139791 | 22929.1 |
| upf0259 family protein | DQE83_20490 | Not Available | Positive | 4140148 - 4140891 | 26420.6 |
| intracellular septation protein a | DQE83_20495 | Not Available | Positive | 4140921 - 4141460 | 20805.3 |
| acyl-coa thioesterase | DQE83_20500 | Not Available | Positive | 4141565 - 4141963 | 14231.4 |
| tonb system transport protein tonb | DQE83_20505 | Not Available | Negative | 4142003 - 4142722 | 26049.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





