Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | DQE83_20405 | Not Available | Positive | 4124704 - 4125462 | 27935.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DQE83_20410 | Not Available | Positive | 4125459 - 4126049 | 22010.2 |
| 23s rrna pseudouridylate synthase b | DQE83_20415 | Not Available | Negative | 4126089 - 4126964 | 32727.4 |
| duf2207 domain-containing protein | DQE83_20420 | Not Available | Negative | 4127177 - 4129066 | 71171.1 |
| threonylcarbamoyl-amp synthase | DQE83_20425 | Not Available | Negative | 4129094 - 4129714 | 23213.2 |
| 5'-3' exoribonuclease | DQE83_20430 | Not Available | Negative | 4129711 - 4130592 | 32655.9 |
| trp operon leader peptide | DQE83_20435 | Not Available | Positive | 4130730 - 4130774 | 1723.19 |
| anthranilate synthase component i | DQE83_20440 | Not Available | Positive | 4130866 - 4132428 | 57583.9 |
| bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase | DQE83_20445 | Not Available | Positive | 4132428 - 4134023 | 56903.4 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | DQE83_20450 | Not Available | Positive | 4134027 - 4135385 | 49369.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





