Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase dbpa | DQE83_20350 | Not Available | Positive | 4114537 - 4115910 | 49256.8 |
| trna 2-thiocytidine(32) synthetase ttca | DQE83_20355 | Not Available | Negative | 4116039 - 4116974 | 35517.9 |
| site-specific integrase | DQE83_20360 | Not Available | Negative | 4117026 - 4117631 | 23075.8 |
| transcriptional regulator | DQE83_20370 | Not Available | Negative | 4117775 - 4118662 | 32683.3 |
| hypothetical protein | DQE83_20375 | Not Available | Negative | 4118908 - 4119087 | 6502.32 |
| is110 family transposase | DQE83_20380 | Not Available | Negative | 4119548 - 4119897 | 12939.7 |
| type i dna topoisomerase | DQE83_20385 | Not Available | Negative | 4120171 - 4122768 | 97370.0 |
| hypothetical protein | DQE83_20390 | Not Available | Negative | 4122891 - 4123103 | 8189.05 |
| hypothetical protein | DQE83_20395 | Not Available | Positive | 4123148 - 4123399 | 9386.17 |
| protease | DQE83_20400 | Not Available | Negative | 4123435 - 4124484 | 39368.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





