Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2543 family protein | DQE83_20090 | Not Available | Negative | 4062228 - 4062473 | 9307.77 |
| putrescine importer puup | DQE83_20095 | Not Available | Negative | 4062607 - 4063992 | 50855.9 |
| gamma-glutamylputrescine synthetase puua | DQE83_20100 | Not Available | Negative | 4064295 - 4065713 | 53180.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | DQE83_20105 | Not Available | Positive | 4065925 - 4066689 | 27990.6 |
| transcriptional regulator | DQE83_20110 | Not Available | Positive | 4066716 - 4067273 | 20092.8 |
| aldehyde dehydrogenase puuc | DQE83_20115 | Not Available | Positive | 4067423 - 4068910 | 53379.4 |
| fad-binding oxidoreductase | DQE83_20120 | Not Available | Positive | 4068912 - 4070192 | 47144.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DQE83_20125 | Not Available | Positive | 4070230 - 4071495 | 44706.6 |
| phage shock protein operon transcriptional activator | DQE83_20130 | Not Available | Negative | 4071615 - 4072592 | 36959.6 |
| phage shock protein pspa | DQE83_20135 | Not Available | Positive | 4072759 - 4073427 | 25522.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





