Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase acna | DQE83_19980 | Not Available | Positive | 4040833 - 4043508 | 97797.0 |
| gtp cyclohydrolase ii | DQE83_19985 | Not Available | Negative | 4043572 - 4044162 | 21837.3 |
| phosphatidylglycerophosphatase b | DQE83_19990 | Not Available | Positive | 4044332 - 4045096 | 29020.9 |
| lapa family protein | DQE83_19995 | Not Available | Positive | 4045245 - 4045553 | 11324.1 |
| lipopolysaccharide assembly protein lapb | DQE83_20000 | Not Available | Positive | 4045560 - 4046729 | 44503.5 |
| orotidine-5'-phosphate decarboxylase | DQE83_20005 | Not Available | Positive | 4046921 - 4047658 | 26231.6 |
| stress response translation initiation inhibitor ycih | DQE83_20010 | Not Available | Positive | 4047658 - 4047984 | 11411.0 |
| osmotically-inducible lipoprotein osmb | DQE83_20015 | Not Available | Negative | 4048110 - 4048328 | 6975.54 |
| deor/glpr transcriptional regulator | DQE83_20020 | Not Available | Negative | 4048597 - 4049346 | 27617.2 |
| hypothetical protein | DQE83_20025 | Not Available | Negative | 4049436 - 4049609 | 6441.71 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





