Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps biosynthesis protein | DQE83_19810 | Not Available | Negative | 4014868 - 4015914 | 39491.3 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DQE83_19815 | Not Available | Negative | 4015926 - 4017029 | 40959.7 |
| hypothetical protein | DQE83_19820 | Not Available | Negative | 4017041 - 4017259 | 8244.25 |
| transcription termination factor rho | DQE83_19825 | Not Available | Negative | 4017269 - 4018528 | 47007.1 |
| rho operon leader peptide | DQE83_19830 | Not Available | Negative | 4018613 - 4018714 | 3750.4 |
| thiol reductase thioredoxin | DQE83_19835 | Not Available | Negative | 4018855 - 4019184 | 11807.2 |
| atp-dependent rna helicase rhlb | DQE83_19840 | Not Available | Positive | 4019315 - 4020580 | 47128.7 |
| addiction module toxin rele | DQE83_19845 | Not Available | Positive | 4020588 - 4020710 | 4619.48 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | DQE83_19850 | Not Available | Positive | 4020716 - 4022200 | 54959.6 |
| atp-dependent dna helicase rep | DQE83_19855 | Not Available | Negative | 4022247 - 4024268 | 77011.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





