Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-amino-6-(5-phospho-d-ribitylamino)uracil phosphatase yigb | DQE83_19660 | Not Available | Negative | 3986988 - 3987704 | 27093.3 |
| tyrosine recombinase xerc | DQE83_19665 | Not Available | Negative | 3987704 - 3988600 | 33811.6 |
| duf484 domain-containing protein | DQE83_19670 | Not Available | Negative | 3988597 - 3989304 | 26730.4 |
| diaminopimelate epimerase | DQE83_19675 | Not Available | Negative | 3989301 - 3990125 | 30210.4 |
| hypothetical protein | DQE83_19680 | Not Available | Negative | 3990162 - 3990365 | 7177.59 |
| hypothetical protein | DQE83_19685 | Not Available | Positive | 3990524 - 3990787 | 9865.97 |
| iron donor protein cyay | DQE83_19690 | Not Available | Positive | 3990835 - 3991155 | 12232.0 |
| adenylate cyclase | DQE83_19695 | Not Available | Negative | 3991195 - 3993741 | 97564.3 |
| hypothetical protein | DQE83_19700 | Not Available | Positive | 3993769 - 3993975 | 7971.76 |
| hydroxymethylbilane synthase | DQE83_19705 | Not Available | Positive | 3994128 - 3995069 | 33867.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





