Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | DQE83_19560 | Not Available | Negative | 3966246 - 3967673 | 54738.7 |
| hypothetical protein | DQE83_19565 | Not Available | Positive | 3967657 - 3967914 | 9422.16 |
| uridine phosphorylase | DQE83_19570 | Not Available | Negative | 3967814 - 3968575 | 27151.7 |
| dienelactone hydrolase family protein | DQE83_19575 | Not Available | Positive | 3968837 - 3969652 | 29469.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | DQE83_19580 | Not Available | Negative | 3969692 - 3971953 | 84686.1 |
| transcriptional regulator | DQE83_19585 | Not Available | Positive | 3972071 - 3973024 | 35645.1 |
| dmt family transporter | DQE83_19590 | Not Available | Negative | 3972912 - 3973811 | 33755.9 |
| pyridoxal phosphate phosphatase yigl | DQE83_19595 | Not Available | Negative | 3973887 - 3974687 | 29723.5 |
| lysophospholipase l2 | DQE83_19600 | Not Available | Negative | 3974695 - 3975717 | 38976.4 |
| homoserine/homoserine lactone efflux protein | DQE83_19605 | Not Available | Positive | 3975828 - 3976448 | 22428.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





