Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-flavin reductase | DQE83_19510 | Not Available | Negative | 3957778 - 3958479 | 26227.4 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | DQE83_19515 | Not Available | Negative | 3958525 - 3960018 | 55627.9 |
| transcription/translation regulatory transformer protein rfah | DQE83_19520 | Not Available | Positive | 3960185 - 3960673 | 18341.3 |
| tat-linked quality control protein tatd | DQE83_19525 | Not Available | Negative | 3960670 - 3961452 | 29061.7 |
| sec-independent protein translocase subunit tatc | DQE83_19530 | Not Available | Negative | 3961494 - 3962270 | 28877.0 |
| twin-arginine translocase subunit tatb | DQE83_19535 | Not Available | Negative | 3962273 - 3962788 | 18451.8 |
| twin-arginine translocase subunit tata | DQE83_19540 | Not Available | Negative | 3962792 - 3963061 | 9664.5 |
| ubiquinone biosynthesis protein ubib | DQE83_19545 | Not Available | Negative | 3963140 - 3964780 | 63190.3 |
| scp2 domain-containing protein | DQE83_19550 | Not Available | Negative | 3964777 - 3965382 | 22123.8 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | DQE83_19555 | Not Available | Negative | 3965396 - 3966151 | 28074.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





