Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | DQE83_19455 | Not Available | Negative | 3946724 - 3947524 | 29993.4 |
| lysr family transcriptional regulator | DQE83_19460 | Not Available | Positive | 3947765 - 3948679 | 33712.7 |
| 2,5-didehydrogluconate reductase dkgb | DQE83_19465 | Not Available | Negative | 3948676 - 3949479 | 29461.3 |
| Trna-asp | Not Available | Not Available | Positive | 3949641 - 3949717 | Not Available |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | DQE83_19480 | Not Available | Negative | 3950043 - 3950588 | 21217.4 |
| trk system potassium uptake protein trkh | DQE83_19485 | Not Available | Negative | 3950600 - 3952051 | 52962.9 |
| impact family protein | DQE83_19490 | Not Available | Negative | 3952090 - 3952704 | 21708.1 |
| xaa-pro dipeptidase | DQE83_19495 | Not Available | Negative | 3952704 - 3954035 | 50178.9 |
| fatty acid oxidation complex subunit alpha fadb | DQE83_19500 | Not Available | Positive | 3954225 - 3956414 | 79568.4 |
| acetyl-coa c-acyltransferase fada | DQE83_19505 | Not Available | Positive | 3956424 - 3957587 | 40848.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





