Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssg | DQE83_19405 | Not Available | Positive | 3939235 - 3940230 | 37491.5 |
| cytoplasmic protein | DQE83_19410 | Not Available | Positive | 3940241 - 3941287 | 38864.2 |
| Trna-asp | Not Available | Not Available | Positive | 3941419 - 3941495 | Not Available |
| hypothetical protein | DQE83_19420 | Not Available | Positive | 3941509 - 3941739 | 8483.46 |
| dna polymerase iii subunit epsilon | DQE83_19425 | Not Available | Negative | 3941628 - 3942359 | 27188.6 |
| ribonuclease hi | DQE83_19430 | Not Available | Positive | 3942424 - 3942891 | 17628.0 |
| sam-dependent methyltransferase | DQE83_19435 | Not Available | Negative | 3942888 - 3943610 | 27212.7 |
| hydroxyacylglutathione hydrolase | DQE83_19440 | Not Available | Positive | 3943644 - 3944399 | 28501.1 |
| lytic transglycosylase | DQE83_19445 | Not Available | Positive | 3944471 - 3945829 | 49420.3 |
| sam-dependent methyltransferase | DQE83_19450 | Not Available | Negative | 3945877 - 3946647 | 28264.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





