Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_19300 | Not Available | Negative | 3917359 - 3917832 | 17206.8 |
| hypothetical protein | DQE83_19305 | Not Available | Negative | 3917817 - 3918287 | 17061.2 |
| duf2094 domain-containing protein | DQE83_19310 | Not Available | Negative | 3918315 - 3919082 | 29315.9 |
| type vi secretion system membrane subunit tssm | DQE83_19315 | Not Available | Negative | 3919079 - 3922945 | 143299.0 |
| hypothetical protein | DQE83_19320 | Not Available | Negative | 3923102 - 3923596 | 18276.7 |
| hypothetical protein | DQE83_19325 | Not Available | Negative | 3923593 - 3924375 | 29548.3 |
| type vi secretion system protein tssl | DQE83_19330 | Not Available | Negative | 3924382 - 3925698 | 48397.6 |
| type vi secretion system baseplate subunit tssk | DQE83_19335 | Not Available | Negative | 3925695 - 3927029 | 49989.2 |
| type vi secretion system lipoprotein tssj | DQE83_19340 | Not Available | Negative | 3927033 - 3927566 | 20183.2 |
| type vi secretion system tube protein hcp | DQE83_19345 | Not Available | Negative | 3927634 - 3928119 | 17660.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





