Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoheptose isomerase | DQE83_19240 | Not Available | Negative | 3903565 - 3904143 | 20816.0 |
| acyl-coa dehydrogenase | DQE83_19245 | Not Available | Positive | 3904383 - 3906827 | 89213.7 |
| c-lysozyme inhibitor | DQE83_19250 | Not Available | Negative | 3906861 - 3907334 | 16878.3 |
| amidohydrolase | DQE83_19255 | Not Available | Positive | 3907488 - 3908258 | 28956.5 |
| toxin syme, type i toxin-antitoxin system family protein | DQE83_19260 | Not Available | Positive | 3908368 - 3908601 | 8628.48 |
| smi1/knr4 family protein | DQE83_19265 | Not Available | Negative | 3908649 - 3909038 | 14618.9 |
| rhs repeat protein | DQE83_19270 | Not Available | Negative | 3909089 - 3913222 | 154766.0 |
| duf1795 domain-containing protein | DQE83_19275 | Not Available | Negative | 3913243 - 3913686 | 16410.5 |
| type vi secretion system tip protein vgrg | DQE83_19280 | Not Available | Negative | 3913710 - 3915902 | 79672.0 |
| hypothetical protein | DQE83_19285 | Not Available | Negative | 3915927 - 3916298 | 14465.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





