Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | DQE83_19190 | Not Available | Negative | 3895266 - 3896810 | 58182.6 |
| putative lateral flagellar export/assembly protein lafu | DQE83_19195 | Not Available | Negative | 3896965 - 3897735 | 28433.3 |
| flagellar biosynthesis protein flha | DQE83_19200 | Not Available | Positive | 3897695 - 3899434 | 63274.3 |
| transposase | DQE83_19205 | Not Available | Negative | 3899551 - 3900048 | 19921.7 |
| hypothetical protein | DQE83_19210 | Not Available | Negative | 3899994 - 3900182 | 7041.73 |
| peptidoglycan endopeptidase | DQE83_19215 | Not Available | Negative | 3900225 - 3900974 | 28809.4 |
| type ii toxin-antitoxin system antitoxin dinj | DQE83_19220 | Not Available | Positive | 3901184 - 3901444 | 9393.28 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | DQE83_19225 | Not Available | Positive | 3901447 - 3901725 | 10780.2 |
| transpeptidase | DQE83_19230 | Not Available | Positive | 3901881 - 3902621 | 28022.8 |
| class ii glutamine amidotransferase | DQE83_19235 | Not Available | Negative | 3902592 - 3903359 | 28637.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





