Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | DQE83_18965 | Not Available | Negative | 3858274 - 3859401 | 41271.4 |
| arsc family reductase | DQE83_18970 | Not Available | Negative | 3859405 - 3859761 | 13489.1 |
| hypothetical protein | DQE83_18975 | Not Available | Positive | 3860142 - 3860201 | 2408.02 |
| hypothetical protein | DQE83_18980 | Not Available | Positive | 3860476 - 3860904 | 16363.9 |
| cytosine methyltransferase | DQE83_18985 | Not Available | Positive | 3860905 - 3861150 | 8567.38 |
| ykgj family cysteine cluster protein | DQE83_18990 | Not Available | Positive | 3861211 - 3861540 | 11799.1 |
| hypothetical protein | DQE83_19000 | Not Available | Negative | 3861789 - 3862403 | 22968.1 |
| transporter | DQE83_19005 | Not Available | Positive | 3862515 - 3862640 | 4583.55 |
| aldehyde dehydrogenase iron-sulfur subunit | DQE83_19010 | Not Available | Positive | 3862809 - 3863498 | 24381.1 |
| xanthine dehydrogenase family protein subunit m | DQE83_19015 | Not Available | Positive | 3863495 - 3864451 | 33914.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





