Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component system sensor histidine kinase qsee/glrk | DQE83_18505 | Not Available | Positive | 3748191 - 3749618 | 53328.6 |
| two-component system qseef-associated lipoprotein qseg | DQE83_18510 | Not Available | Positive | 3749782 - 3750495 | 27300.4 |
| transcriptional regulator | DQE83_18515 | Not Available | Positive | 3750485 - 3751819 | 49152.3 |
| nitrogen regulatory protein p-ii 1 | DQE83_18520 | Not Available | Positive | 3751880 - 3752218 | 12426.2 |
| no-inducible flavohemoprotein | DQE83_18525 | Not Available | Negative | 3752263 - 3753453 | 43780.0 |
| serine hydroxymethyltransferase | DQE83_18530 | Not Available | Positive | 3753781 - 3755034 | 45305.1 |
| rok family protein | DQE83_18535 | Not Available | Negative | 3755232 - 3756425 | 44497.3 |
| duf5107 domain-containing protein | DQE83_18540 | Not Available | Positive | 3756543 - 3759824 | 123849.0 |
| sugar abc transporter substrate-binding protein | DQE83_18545 | Not Available | Positive | 3759921 - 3760904 | 35018.1 |
| sugar abc transporter atp-binding protein | DQE83_18550 | Not Available | Positive | 3760927 - 3762438 | 55007.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





