Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copg family transcriptional regulator | DQE83_18295 | Not Available | Negative | 3704602 - 3704814 | 8205.94 |
| hypothetical protein | DQE83_18300 | Not Available | Positive | 3705123 - 3705341 | 8261.81 |
| hypothetical protein | DQE83_18305 | Not Available | Negative | 3705363 - 3705464 | 3672.48 |
| hypothetical protein | DQE83_18310 | Not Available | Negative | 3705514 - 3707328 | 67444.6 |
| gnat family n-acetyltransferase | DQE83_18315 | Not Available | Negative | 3707743 - 3708732 | 37096.5 |
| d-aminoacyl-trna deacylase | DQE83_18320 | Not Available | Negative | 3708729 - 3709166 | 15951.0 |
| virulence factor brkb family protein | DQE83_18325 | Not Available | Negative | 3709163 - 3710035 | 32826.7 |
| phosphatase | DQE83_18330 | Not Available | Negative | 3710029 - 3710628 | 22733.0 |
| aldose 1-epimerase | DQE83_18335 | Not Available | Negative | 3710769 - 3711656 | 33008.1 |
| mfs transporter | DQE83_18340 | Not Available | Negative | 3711646 - 3712995 | 49225.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





