Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator rhas | DQE83_18195 | Not Available | Negative | 3684194 - 3685030 | 32223.1 |
| rhamnulokinase | DQE83_18200 | Not Available | Positive | 3685318 - 3686787 | 54069.2 |
| l-rhamnose isomerase | DQE83_18205 | Not Available | Positive | 3686784 - 3688043 | 47203.9 |
| rhamnulose-1-phosphate aldolase | DQE83_18210 | Not Available | Positive | 3688228 - 3689052 | 30004.0 |
| l-rhamnose mutarotase | DQE83_18215 | Not Available | Positive | 3689062 - 3689376 | 12235.4 |
| porin | DQE83_18220 | Not Available | Negative | 3689417 - 3690811 | 51960.3 |
| pts fructose transporter subunit iia | DQE83_18225 | Not Available | Positive | 3691287 - 3691733 | 16087.4 |
| fructose-like pts system eiibc component | DQE83_18230 | Not Available | Positive | 3691744 - 3693195 | 51123.5 |
| aminopeptidase | DQE83_18235 | Not Available | Positive | 3693185 - 3694255 | 38799.8 |
| transcriptional regulator | DQE83_18240 | Not Available | Positive | 3694255 - 3696003 | 66095.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





