Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | DQE83_17995 | Not Available | Negative | 3644441 - 3645346 | 32867.4 |
| catalase-peroxidase | DQE83_18000 | Not Available | Negative | 3645439 - 3647619 | 80058.0 |
| 5,10-methylenetetrahydrofolate reductase | DQE83_18005 | Not Available | Negative | 3647947 - 3648837 | 33104.5 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | DQE83_18010 | Not Available | Negative | 3649188 - 3651620 | 88963.9 |
| cystathionine gamma-synthase | DQE83_18015 | Not Available | Negative | 3651623 - 3652783 | 41580.9 |
| met repressor | DQE83_18020 | Not Available | Positive | 3653060 - 3653377 | 12141.4 |
| yiix family permuted papain-like enzyme | DQE83_18025 | Not Available | Positive | 3653437 - 3654045 | 23143.9 |
| 50s ribosomal protein l31 | DQE83_18030 | Not Available | Negative | 3654106 - 3654318 | 7871.49 |
| primosomal protein n' | DQE83_18035 | Not Available | Positive | 3654521 - 3656719 | 81659.6 |
| transcriptional regulator | DQE83_18040 | Not Available | Positive | 3656875 - 3657900 | 37822.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





