Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase fabg | DQE83_17530 | Not Available | Positive | 3548422 - 3549153 | 25678.1 |
| beta-ketoacyl-acp synthase | DQE83_17535 | Not Available | Positive | 3549150 - 3550379 | 44097.3 |
| 4'-phosphopantetheinyl transferase acpt | DQE83_17540 | Not Available | Positive | 3550381 - 3550968 | 21728.8 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | DQE83_17545 | Not Available | Positive | 3551079 - 3552653 | 58777.2 |
| nickel abc transporter permease subunit nikb | DQE83_17550 | Not Available | Positive | 3552653 - 3553597 | 35197.2 |
| nickel abc transporter permease subunit nikc | DQE83_17555 | Not Available | Positive | 3553594 - 3554427 | 30363.8 |
| nickel import atp-binding protein nikd | DQE83_17560 | Not Available | Positive | 3554427 - 3555191 | 26803.1 |
| nickel import atp-binding protein nike | DQE83_17565 | Not Available | Positive | 3555188 - 3555994 | 29796.7 |
| nickel-responsive transcriptional regulator nikr | DQE83_17570 | Not Available | Positive | 3556000 - 3556401 | 15126.7 |
| hypothetical protein | DQE83_17575 | Not Available | Positive | 3556600 - 3557346 | 28464.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





