Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_16965 | Not Available | Negative | 3428920 - 3429084 | 5893.97 |
| pirin family protein | DQE83_16970 | Not Available | Negative | 3429107 - 3429808 | 25955.0 |
| lysr family transcriptional regulator | DQE83_16975 | Not Available | Positive | 3429913 - 3430809 | 33259.4 |
| duf805 domain-containing protein | DQE83_16985 | Not Available | Negative | 3430860 - 3431216 | 13440.7 |
| duf805 domain-containing protein | DQE83_16990 | Not Available | Negative | 3431458 - 3431823 | 14311.8 |
| glutathione s-transferase family protein | DQE83_16995 | Not Available | Negative | 3432117 - 3433103 | 37424.1 |
| doxx family protein | DQE83_17000 | Not Available | Negative | 3433242 - 3433724 | 17216.6 |
| hypothetical protein | DQE83_17005 | Not Available | Negative | 3433821 - 3434120 | 11781.4 |
| hypothetical protein | DQE83_17010 | Not Available | Negative | 3434110 - 3434514 | 15148.0 |
| duf883 domain-containing protein | DQE83_17015 | Not Available | Negative | 3434517 - 3434822 | 11052.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





