Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_16745 | Not Available | Positive | 3388630 - 3389265 | 23197.3 |
| permease | DQE83_16750 | Not Available | Positive | 3389338 - 3390378 | 37223.9 |
| osmotically-inducible protein osmy | DQE83_16755 | Not Available | Negative | 3390491 - 3391066 | 20059.1 |
| phosphoheptose isomerase | DQE83_16760 | Not Available | Negative | 3391076 - 3391666 | 21091.4 |
| yran family protein | DQE83_16765 | Not Available | Negative | 3391686 - 3392081 | 14784.4 |
| penicillin-binding protein activator | DQE83_16770 | Not Available | Negative | 3392039 - 3394084 | 73018.5 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DQE83_16775 | Not Available | Positive | 3394149 - 3395012 | 31478.8 |
| galactosamine-6-phosphate isomerase | DQE83_16780 | Not Available | Negative | 3395062 - 3395829 | 28414.3 |
| pts n-acetylgalactosamine transporter subunit iic | DQE83_16790 | Not Available | Negative | 3396611 - 3397414 | 28632.5 |
| n-acetylgalactosamine-specific phosphotransferase enzyme iib component 1 | DQE83_16795 | Not Available | Negative | 3397453 - 3397929 | 17609.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





